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Annotation of /FigKernelScripts/extract_data_for_syncing_after_update.pl

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1 : overbeek 1.2 use P2Pupdate;
2 :    
3 : overbeek 1.1 use FIG;
4 :     my $fig = new FIG;
5 :    
6 : overbeek 1.3 # usage: extract_data_for_syncing_after_update SyncFromDate(MM/DD/YYYY) AssignmentsPackage AnnotationsPackage TranslationRulesPackage SubsystemsPackage
7 : overbeek 1.1
8 :     (
9 :     ($sync_from_date = shift @ARGV) &&
10 :     ($assignments_package = shift @ARGV) &&
11 : overbeek 1.3 ($annotations_package = shift @ARGV) &&
12 : overbeek 1.1 ($trans_rules_package = shift @ARGV) &&
13 :     ($subsys_package = shift @ARGV)
14 :     )
15 : overbeek 1.3 || die "usage: extract_data_for_syncing_after_update SyncFromData(MM/DD/YYYY) AssignmentsPackage AnnotationsPackage TranslationRulesPackage SubsystemsPackage\
16 :     ";
17 : overbeek 1.1
18 : overbeek 1.2 &P2Pupdate::package_translation_rules($FIG_Config::fig,$trans_rules_package);
19 : overbeek 1.1 &P2Pupdate::package_subsystems($fig,$subsys_package,0);
20 :    
21 : overbeek 1.3 my(@genomes) = $fig->genomes;
22 : overbeek 1.1 &P2Pupdate::package_assignments($fig,"master","master",$sync_from_date,\@genomes,$assignments_package);
23 : overbeek 1.3 &P2Pupdate::package_annotations($fig,"master",$sync_from_date,\@genomes,$annotations_package);
24 : overbeek 1.1

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