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1 : efrank 1.1 # -*- perl -*-
2 : olson 1.3 #
3 :     # Copyright (c) 2003-2006 University of Chicago and Fellowship
4 :     # for Interpretations of Genomes. All Rights Reserved.
5 :     #
6 :     # This file is part of the SEED Toolkit.
7 :     #
8 :     # The SEED Toolkit is free software. You can redistribute
9 :     # it and/or modify it under the terms of the SEED Toolkit
10 :     # Public License.
11 :     #
12 :     # You should have received a copy of the SEED Toolkit Public License
13 :     # along with this program; if not write to the University of Chicago
14 :     # at info@ci.uchicago.edu or the Fellowship for Interpretation of
15 :     # Genomes at veronika@thefig.info or download a copy from
16 :     # http://www.theseed.org/LICENSE.TXT.
17 :     #
18 :    
19 : efrank 1.1
20 :     use Carp;
21 :     use Data::Dumper;
22 :     use FIG;
23 :    
24 :     my $fig = new FIG;
25 :     $| = 1;
26 :    
27 :     while (defined($_ = <STDIN>))
28 :     {
29 :     chop;
30 :     ($fam,$peg) = split(/\t/,$_);
31 : overbeek 1.2 if ($seq = $fig->get_translation($peg))
32 : efrank 1.1 {
33 :     print ">$peg\_$fam\n$seq\n";
34 :     }
35 :     }
36 :    
37 :    
38 :     undef $fig;

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