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Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 5 21:15:22 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_2008_0924, rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912, rast_release_2008_09_29
Changes since 1.15: +1 -1 lines
Diff to previous 1.15
add $ENV{SORT_ARGS} to sort invocations for running on large-memory machines

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 5 21:12:21 2007 UTC (12 years, 2 months ago) by olson
Branch: MAIN
Changes since 1.14: +53 -11 lines
Diff to previous 1.14
rollup of changes for anno clearinghouse, RAST->SEED import.

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Nov 6 02:20:17 2006 UTC (13 years ago) by overbeek
Branch: MAIN
Changes since 1.13: +48 -40 lines
Diff to previous 1.13
correct BBHs computation to handle sims with both xxx and fig version of an ID

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Oct 10 18:37:14 2006 UTC (13 years, 1 month ago) by olson
Branch: MAIN
Changes since 1.12: +1 -1 lines
Diff to previous 1.12
readonly fixes; seed-run-job update to run from input file

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 15 11:25:42 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.11: +2 -0 lines
Diff to previous 1.11
fix yet another bug in all_bbhs - this one relating to deleted_fids

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 13 23:01:12 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.10: +8 -8 lines
Diff to previous 1.10
pass extra argument in all_bbhs

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 13 22:57:02 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.9: +4 -1 lines
Diff to previous 1.9
fix bug in all_bbhs relating to deleted fids

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 6 13:59:26 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.8: +1 -1 lines
Diff to previous 1.8
remove debugging in all_bbhs

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 5 18:21:35 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.7: +5 -3 lines
Diff to previous 1.7
handle deleted FIDs in all_bbhs

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 5 13:13:39 2006 UTC (13 years, 2 months ago) by overbeek
Branch: MAIN
Changes since 1.6: +1 -1 lines
Diff to previous 1.6
handle duplicate sims in forming BBHs in all_bbhs

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 3 04:21:45 2006 UTC (13 years, 3 months ago) by overbeek
Branch: MAIN
Changes since 1.5: +1 -1 lines
Diff to previous 1.5
ross bbh bugfix

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Aug 3 04:18:31 2006 UTC (13 years, 3 months ago) by overbeek
Branch: MAIN
Changes since 1.4: +35 -17 lines
Diff to previous 1.4
ross bbh bugfix

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 18 12:27:21 2006 UTC (13 years, 6 months ago) by overbeek
Branch: MAIN
Changes since 1.3: +14 -10 lines
Diff to previous 1.3
add normalizded bit scores to BBHs

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 5 18:56:37 2005 UTC (13 years, 11 months ago) by olson
Branch: MAIN
CVS Tags: caBIG-05Apr06-00, caBIG-13Feb06-00
Changes since 1.2: +17 -0 lines
Diff to previous 1.2
Add license words.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 19 03:08:59 2005 UTC (14 years, 2 months ago) by overbeek
Branch: MAIN
CVS Tags: caBIG-00-00-00, caBIG-dataload-0
Changes since 1.1: +68 -26 lines
Diff to previous 1.1
fixes in BBH generation

Revision 1.1.2.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jun 27 15:26:44 2005 UTC (14 years, 4 months ago) by olson
Branch: Branch-bobdev_news
CVS Tags: merge-bobdev_news-1, merge-bobdev_news-2, merge-bodev_news-3
Changes since 1.1: +0 -0 lines
Diff to previous 1.1 , to next main 1.16
Merged from trunk.

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jun 22 21:54:41 2005 UTC (14 years, 4 months ago) by overbeek
Branch: MAIN
CVS Tags: merge-trunktag-bobdev_news-1, merge-trunktag-bobdev_news-2, merge-trunktag-bodev_news-3
Branch point for: Branch-bobdev_news
new bbhs script

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