[Bio] / FigKernelScripts / TransactFeatures.pl Repository:
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revision 1.6, Thu Aug 11 05:16:46 2005 UTC revision 1.7, Thu Aug 11 16:36:01 2005 UTC
# Line 37  Line 37 
37  Annotate the features created by the transactions so as to indicate how they were  Annotate the features created by the transactions so as to indicate how they were
38  derived.  derived.
39    
40    =item check
41    
42    Verify that the locations and translations of the new and changed features are
43    correct.
44    
45  =item fix  =item fix
46    
47  Fix the locations of new features and verify the translations of new and changed  Fix the locations and translations of the new and changed features.
 features.  
48    
49  =back  =back
50    
# Line 189  Line 193 
193      $controlBlock = ApplyTransactions->new($options, $mainCommand, @parameters);      $controlBlock = ApplyTransactions->new($options, $mainCommand, @parameters);
194  } elsif ($mainCommand eq 'annotate') {  } elsif ($mainCommand eq 'annotate') {
195      $controlBlock = AnnotateTransactions->new($options, $mainCommand, @parameters);      $controlBlock = AnnotateTransactions->new($options, $mainCommand, @parameters);
196  } elsif ($mainCommand eq 'fix') {  } elsif ($mainCommand eq 'fix' || $mainCommand eq 'check') {
197      $controlBlock = FixTransactions->new($options, $mainCommand, @parameters);      $controlBlock = FixTransactions->new($options, $mainCommand, @parameters);
198  } else {  } else {
199      Confess("Invalid command \"$mainCommand\" specified on command line.");      Confess("Invalid command \"$mainCommand\" specified on command line.");

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