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Index of /FigKernelScripts

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File Rev. Age Author Last log entry
 Parent Directory        
build_nohit_fasta.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
package_annotations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
index_annotations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
update_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
install_assignments.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_external_orgs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
cluster_objects.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_lost_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
verify_pegs_in_tbl.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
blastn_seqs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_sets.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
break_scaffolds.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
get_fasta_for_tbl_entries.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_pch_pins.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_for_unique_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
blast_request.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
lengths_of_contigs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
get_dna.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
install_translation_rules.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
index_translations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
generate_pinned_homologs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
apply_map.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_indexes.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
build_nr.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
merge_translation_rules.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
reformat_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
install_lightweight_code.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
assign_to_hypo.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
assign_with_no_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_ec_names.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
fig_net.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
verify_genome_directory.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
blastp_pseq.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
clean_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
condense_blast.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
index_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
fix_eol.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
package_translation_rules.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
generate_similarities.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
package_lightweight_code.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
delete_genomes_from_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
set_to_relation.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
restore_annotations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_features.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_fast_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
install_annotations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_all_lost_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
init_FIG.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
map_pegs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_peg_mapping.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
restore_assignments.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_protein_families.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_sim_sets.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
assign.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
reformat_dsim_dbs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
package_assignments.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
index_neighborhoods.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
pull_fasta_entries.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
bring_system_up_to_date.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
merge_annotations.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
index_contigs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
build_access_sets.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
compute_changed_ids_for_nrs.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_protein_sets.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
update_taxonomies.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
splitup.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
generate_input_for_auto_assignments.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_tbl.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
uninstall.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_transferable_chunks.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
package_code.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
uninstall.sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
check_changes_in_organisms.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
auto_assign.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
parse_genbank.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
fasta_for_hypo.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
put_directory_in_one_file.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
compute_potential_fusions.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_binary.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
build_excel_gene_table.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
reduce_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_kegg.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_calls.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
add_assertions_of_function.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
extract_genomes.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
process_new_sims.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
restore_translation_rules.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
build_exemplar_fasta.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
make_occ_counts.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
align_with_clustal.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
fig.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
install_code.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
list_genomes.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
rationalize_blast.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
load_chromosomal_clusters.pl  1.1  16 years  efrank   Makefile: get it to work with the release tools All the rest: had to rename...
Makefile  1.3  16 years  efrank   Use PKGNAME macro from the top makefile
README  1.1.1.1  16 years  efrank   import

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