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Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Nov 24 21:22:46 2009 UTC (10 years ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928
Changes since 1.19: +2 -0 lines
Diff to previous 1.19
Add more modules to the SAS toolkit.

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Nov 24 21:00:40 2009 UTC (10 years ago) by parrello
Branch: MAIN
Changes since 1.18: +6 -7 lines
Diff to previous 1.18
Removed Tracer dependency.

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Mar 15 23:57:37 2009 UTC (10 years, 8 months ago) by parrello
Branch: MAIN
CVS Tags: rast_rel_2009_03_26, rast_rel_2009_05_18, rast_rel_2009_07_09, rast_rel_2009_0925
Changes since 1.17: +7 -6 lines
Diff to previous 1.17
Added tracing support.

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 17 18:32:52 2008 UTC (11 years, 7 months ago) by disz
Branch: MAIN
CVS Tags: mgrast_rel_2008_0625, mgrast_rel_2008_0806, mgrast_rel_2008_0917, mgrast_rel_2008_0919, mgrast_rel_2008_0923, mgrast_rel_2008_0924, mgrast_rel_2008_1110, mgrast_rel_2008_1110_v2, rast_2008_0924, rast_rel_2008_04_23, rast_rel_2008_06_16, rast_rel_2008_06_18, rast_rel_2008_07_21, rast_rel_2008_08_07, rast_rel_2008_09_29, rast_rel_2008_09_30, rast_rel_2008_10_09, rast_rel_2008_10_29, rast_rel_2008_11_24, rast_rel_2008_12_18, rast_rel_2009_02_05, rast_release_2008_09_29
Changes since 1.16: +8 -2 lines
Diff to previous 1.16
added subsyste display on hover

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Mar 25 17:32:42 2008 UTC (11 years, 8 months ago) by disz
Branch: MAIN
Changes since 1.15: +80 -1 lines
Diff to previous 1.15
Additions for JAVA tree based annotation

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Mar 7 17:06:25 2008 UTC (11 years, 9 months ago) by overbeek
Branch: MAIN
Changes since 1.14: +14 -0 lines
Diff to previous 1.14
try to point to the old FigfamsData

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 7 19:35:17 2007 UTC (12 years, 3 months ago) by overbeek
Branch: MAIN
Changes since 1.13: +1 -1 lines
Diff to previous 1.13
fixes to labels with quotes

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Feb 4 13:02:33 2007 UTC (12 years, 10 months ago) by parrello
Branch: MAIN
Changes since 1.12: +1 -1 lines
Diff to previous 1.12
Fixed a compiler warning.

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Feb 1 14:58:06 2007 UTC (12 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.11: +5 -4 lines
Diff to previous 1.11
strip comments on functions for subsystem checking

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jan 29 18:59:08 2007 UTC (12 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.10: +14 -1 lines
Diff to previous 1.10
debugged version of bring_tree_up_to_ali

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jan 11 19:59:54 2007 UTC (12 years, 11 months ago) by overbeek
Branch: MAIN
Changes since 1.9: +1 -1 lines
Diff to previous 1.9
delete temp directories in phylogeny tools

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Jan 6 17:39:41 2007 UTC (12 years, 11 months ago) by overbeek
Branch: MAIN
Changes since 1.8: +1 -1 lines
Diff to previous 1.8
make sure tree insertion code is all committed

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 21 21:36:03 2006 UTC (12 years, 11 months ago) by overbeek
Branch: MAIN
Changes since 1.7: +1 -1 lines
Diff to previous 1.7
handle labels in newick trees

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 21 21:11:28 2006 UTC (12 years, 11 months ago) by overbeek
Branch: MAIN
Changes since 1.6: +2 -1 lines
Diff to previous 1.6
fixes to writing newick trees and a program to evaluate trees

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 4 19:18:26 2006 UTC (13 years ago) by overbeek
Branch: MAIN
Changes since 1.5: +38 -28 lines
Diff to previous 1.5
fixes to representative tree generation and added rep_genomes

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 5 19:06:30 2005 UTC (14 years ago) by olson
Branch: MAIN
CVS Tags: caBIG-05Apr06-00, caBIG-13Feb06-00
Changes since 1.4: +17 -0 lines
Diff to previous 1.4
Added license words.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jan 5 20:24:14 2005 UTC (14 years, 11 months ago) by overbeek
Branch: MAIN
CVS Tags: Root-bobdev_news, caBIG-00-00-00, caBIG-dataload-0, merge-bobdev_news-1, merge-bobdev_news-2, merge-bodev_news-3, merge-trunktag-bobdev_news-1, merge-trunktag-bobdev_news-2, merge-trunktag-bodev_news-3
Branch point for: Branch-bobdev_news
Changes since 1.3: +5 -5 lines
Diff to previous 1.3
minor fixes to subsys.cgi and tree_utilities.pm

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 30 02:30:16 2004 UTC (14 years, 11 months ago) by overbeek
Branch: MAIN
Changes since 1.2: +5 -1 lines
Diff to previous 1.2
add tree manipulation utilities

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jan 29 11:48:30 2004 UTC (15 years, 10 months ago) by overbeek
Branch: MAIN
Changes since 1.1: +36 -1 lines
Diff to previous 1.1
fix bug in display_tree

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 1 16:54:26 2003 UTC (16 years ago) by efrank
Branch: MAIN
Branch point for: initial
Initial revision

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