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Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 29 21:25:46 2005 UTC (14 years, 7 months ago) by olson
Branch: MAIN
CVS Tags: caBIG-00-00-00, caBIG-dataload-0
Changes since 1.5: +48 -0 lines
Diff to previous 1.5
Add methods:

$sim = Sim->new_from_line($line): create a new sim object from a tab-delimited line of text.

$sim->as_line(): return a tab-delimited line of text for hte sim (including terminating newline)

$sim->validate(): return true if the sim is valid.

The class also overloads the convert-to-string method, so you can do stuff like

print "the sim is $sim\n";

and generate output

the sim is sim:kegg|aae:aq_016a->uni|O66436:4.6e-38

right now it just includes id1, id2, and psc. Implemented in Sim.pm as_string() method.

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Aug 1 22:22:13 2005 UTC (14 years, 8 months ago) by parrello
Branch: MAIN
Changes since 1.4: +18 -18 lines
Diff to previous 1.4
Changed attributes to capital-case in order to prevent the avalanche of compile-time warnings.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 9 05:36:30 2005 UTC (14 years, 9 months ago) by parrello
Branch: MAIN
CVS Tags: Root-bobdev_news, merge-bobdev_news-1, merge-bobdev_news-2, merge-bodev_news-3, merge-trunktag-bobdev_news-1, merge-trunktag-bobdev_news-2, merge-trunktag-bodev_news-3
Branch point for: Branch-bobdev_news
Changes since 1.3: +0 -2 lines
Diff to previous 1.3
*** empty log message ***

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Aug 13 01:09:27 2004 UTC (15 years, 7 months ago) by overbeek
Branch: MAIN
Changes since 1.2: +20 -20 lines
Diff to previous 1.2
Reordered access-functions into field order. -- /gdp

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 8 20:26:05 2004 UTC (15 years, 9 months ago) by olson
Branch: MAIN
Changes since 1.1: +23 -18 lines
Diff to previous 1.1
add scalar annotations

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 1 16:54:26 2003 UTC (16 years, 4 months ago) by efrank
Branch: MAIN
Branch point for: initial
Initial revision

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