Log of /FigKernelPackages/P2Pupdate.pm
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Revision
1.62 -
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Sat Aug 23 23:39:22 2008 UTC (11 years, 3 months ago) by
golsen
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CVS Tags:
mgrast_dev_02212011,
mgrast_dev_02222011,
mgrast_dev_03252011,
mgrast_dev_03312011,
mgrast_dev_04012011,
mgrast_dev_04052011,
mgrast_dev_04082011,
mgrast_dev_04132011,
mgrast_dev_05262011,
mgrast_dev_06072011,
mgrast_rel_2008_0625,
mgrast_rel_2008_0806,
mgrast_rel_2008_0917,
mgrast_rel_2008_0919,
mgrast_rel_2008_0923,
mgrast_rel_2008_0924,
mgrast_rel_2008_1110,
mgrast_rel_2008_1110_v2,
mgrast_release_3_0,
mgrast_release_3_0_1,
mgrast_release_3_0_2,
mgrast_release_3_0_3,
mgrast_release_3_0_4,
mgrast_release_3_1_0,
myrast_33,
rast_2008_0924,
rast_rel_2008_09_29,
rast_rel_2008_09_30,
rast_rel_2008_10_09,
rast_rel_2008_10_29,
rast_rel_2008_11_24,
rast_rel_2008_12_18,
rast_rel_2009_02_05,
rast_rel_2009_03_26,
rast_rel_2009_05_18,
rast_rel_2009_07_09,
rast_rel_2009_0925,
rast_rel_2010_0118,
rast_rel_2010_0526,
rast_rel_2010_0827,
rast_rel_2010_0928,
rast_rel_2010_1206,
rast_rel_2011_0119,
rast_release_2008_09_29
Changes since
1.61: +26 -20 lines
Diff to
previous 1.61
Move writing of assignment annotation from a case-by-case basis (and it
was missing in several key places) to the FIG::assign_function.
Modify the code in each of the calling locations to not make duplicate
annotations.
At the same time, remove (most) of the instances of making different
calls to assign_function depending on the user name. assign_function
treats everyone as master (but writes an annotation with the real user
name).
Revision
1.54 -
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Thu Sep 1 19:23:49 2005 UTC (14 years, 3 months ago) by
olson
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Changes since
1.53: +3 -0 lines
Diff to
previous 1.53
Add FIG::by_genome_id for sorting genome ID lists.
Add $fig->extract_assignments_from_annoatations to transform the output of annotations_made_fast
to a list of the current assignments (per the annotations data).
Revision
1.53 -
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Thu Sep 1 18:23:49 2005 UTC (14 years, 3 months ago) by
olson
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Changes since
1.52: +23 -28 lines
Diff to
previous 1.52
Add fast= flag to package_annotations, and the %options array in P2Pupdate::pacakge_annotations
to support it. (skip_aliases and skip_sequences support). Makes export of annotations to a
SEED that you know has the same data for the same ID *MUCH* faster.
Revision
1.52 -
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Thu Sep 1 18:14:53 2005 UTC (14 years, 3 months ago) by
olson
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Changes since
1.51: +77 -0 lines
Diff to
previous 1.51
make package_annotations use $fig->annotations_made_fast.
Add date parsing to FIG.pm ($fig->parse_date) using Date::Parse if available.
Revision
1.22 -
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Tue Feb 10 22:33:42 2004 UTC (15 years, 10 months ago) by
olson
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Changes since
1.21: +24 -0 lines
Diff to
previous 1.21
we need to find the architecture for this seed; since configure doesn't
save it, we go grunking in the generated config/fig-user-env.sh script.
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