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revision 1.498, Thu Jul 20 18:24:07 2006 UTC revision 1.499, Thu Jul 20 19:22:53 2006 UTC
# Line 8121  Line 8121 
8121    
8122  =head3 bbhs  =head3 bbhs
8123    
8124  C<< my @bbhList = $fig->bbhs($peg); >>  C<< my @bbhList = $fig->bbhs($peg, $cutoff); >>
8125    
8126  Return a list of the bi-directional best hits relevant to the specified PEG.  Return a list of the bi-directional best hits relevant to the specified PEG.
8127    
# Line 8131  Line 8131 
8131    
8132  ID of the feature whose bidirectional best hits are desired.  ID of the feature whose bidirectional best hits are desired.
8133    
8134    =item cutoff
8135    
8136    Similarity cutoff. If omitted, 1e-10 is used.
8137    
8138  =item RETURN  =item RETURN
8139    
8140  Returns a list of 2-tuples. The first element of the list is the best-hit PEG; the second  Returns a list of 2-tuples. The first element of the list is the best-hit PEG; the second

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