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Revision 1.23 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Dec 17 20:48:21 2009 UTC (9 years, 11 months ago) by parrello
Branch: MAIN
CVS Tags: HEAD, mgrast_dev_02212011, mgrast_dev_02222011, mgrast_dev_03252011, mgrast_dev_03312011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_04082011, mgrast_dev_04132011, mgrast_dev_05262011, mgrast_dev_06072011, mgrast_dev_08022011, mgrast_dev_08112011, mgrast_dev_10262011, mgrast_dev_12152011, mgrast_release_3_0, mgrast_release_3_0_1, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_4, mgrast_release_3_1_0, mgrast_release_3_1_1, mgrast_release_3_1_2, mgrast_version_3_2, myrast_33, myrast_rel40, rast_rel_2010_0118, rast_rel_2010_0526, rast_rel_2010_0827, rast_rel_2010_0928, rast_rel_2010_1206, rast_rel_2011_0119, rast_rel_2011_0928, rast_rel_2014_0729, rast_rel_2014_0912
Changes since 1.22: +0 -4 lines
Diff to previous 1.22 , to selected 1.21
Removed from the SAS distribution.

Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Dec 7 21:11:52 2009 UTC (10 years ago) by parrello
Branch: MAIN
Changes since 1.21: +0 -112 lines
Diff to previous 1.21
Deleted obsolete methods.

Revision 1.21 - (view) (download) (as text) (annotate) - [selected]
Mon Nov 16 20:05:41 2009 UTC (10 years ago) by disz
Branch: MAIN
Changes since 1.20: +30 -30 lines
Diff to previous 1.20
Removed should_be_member

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Oct 29 18:26:59 2009 UTC (10 years, 1 month ago) by parrello
Branch: MAIN
Changes since 1.19: +478 -38 lines
Diff to previous 1.19 , to selected 1.21
Final server updates.

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Aug 21 21:58:08 2009 UTC (10 years, 3 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_0925
Changes since 1.18: +1 -1 lines
Diff to previous 1.18 , to selected 1.21
increase request size in non-blast case so we don't drown in overhead.

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jul 20 21:48:52 2009 UTC (10 years, 4 months ago) by olson
Branch: MAIN
Changes since 1.17: +31 -0 lines
Diff to previous 1.17 , to selected 1.21
Add find_rnas

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jul 8 20:36:20 2009 UTC (10 years, 5 months ago) by olson
Branch: MAIN
CVS Tags: rast_rel_2009_07_09
Changes since 1.16: +1 -1 lines
Diff to previous 1.16 , to selected 1.21
fix call_genes

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Jul 1 17:43:53 2009 UTC (10 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.15: +35 -1 lines
Diff to previous 1.15 , to selected 1.21
add server-based call_genes

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Jun 29 16:33:40 2009 UTC (10 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.14: +2 -2 lines
Diff to previous 1.14 , to selected 1.21
some protocol changes.

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Jun 19 17:30:02 2009 UTC (10 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.13: +35 -3 lines
Diff to previous 1.13 , to selected 1.21
server fixes

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Jun 4 21:23:01 2009 UTC (10 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.12: +31 -12 lines
Diff to previous 1.12 , to selected 1.21
various fixes, including OTU support

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Fri May 22 17:09:20 2009 UTC (10 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.11: +3 -0 lines
Diff to previous 1.11 , to selected 1.21
fix default parameter setting

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 21 21:53:17 2009 UTC (10 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.10: +8 -3 lines
Diff to previous 1.10 , to selected 1.21
timeout tuning

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 21 21:29:50 2009 UTC (10 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.9: +25 -9 lines
Diff to previous 1.9 , to selected 1.21
chnanges for new protocol

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 13 20:09:56 2009 UTC (10 years, 7 months ago) by arodri7
Branch: MAIN
CVS Tags: rast_rel_2009_05_18
Changes since 1.8: +48 -0 lines
Diff to previous 1.8 , to selected 1.21
added FIGfam functions org_of, function_of, seq_of, aliases_of, and more

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Wed May 13 16:44:04 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.7: +1 -1 lines
Diff to previous 1.7 , to selected 1.21
remove debug stmt

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 12 21:16:29 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.6: +1 -1 lines
Diff to previous 1.6 , to selected 1.21
add status line to dead post error message

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 12 20:17:55 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.5: +6 -0 lines
Diff to previous 1.5 , to selected 1.21
add families_containing_peg

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 11 20:55:05 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.4: +8 -6 lines
Diff to previous 1.4 , to selected 1.21
Parameterize assign_functions_to_DNA to add $min_hits (default to 3) and $max_gap (default to 600) arguments.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Fri May 8 17:08:14 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.3: +21 -1 lines
Diff to previous 1.3 , to selected 1.21
final? changes to the Figfam server code

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Thu May 7 22:07:13 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.2: +27 -5 lines
Diff to previous 1.2 , to selected 1.21
updated figfam clinet code

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 30 20:33:41 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Changes since 1.1: +178 -53 lines
Diff to previous 1.1 , to selected 1.21
more support for stuff

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 28 21:03:25 2009 UTC (10 years, 7 months ago) by olson
Branch: MAIN
Diff to selected 1.21
FF server inteface module

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