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Index of /FigKernelPackages

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File Rev. Age Author Last log entry
 Parent Directory        
Export/        
tests/        
Annotation.pm  1.3  14 years  olson  Added license words.
ApplyTransactions.pm  1.6  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
Assignments.pm  1.7  14 years  overbeek  add check_anno.cgi
BadCall.pm  1.2  14 years  olson  Added license words.
BasicLocation.pm  1.8  14 years  parrello  Added a method to parse out the SEED elements of a location string.
Blast.pm  1.3  14 years  olson  Added license words.
COPYING.TXT  1.1  14 years  olson  add license file
ChromosomalClusters.pm  1.3  14 years  olson  Doh, leetle typo.
Classes.pm  1.1  14 years  mkubal  added Organism class
Clearinghouse.pm  1.4  14 years  olson  Added license words.
Clearinghouse.py  1.10  14 years  olson  Added license words.
Cluster.pm  1.11  14 years  olson  Added license words.
ClusterWorker.pm  1.2  14 years  olson  Added license words.
Construct.pm  1.2  14 years  olson  Added license words.
CountTransactions.pm  1.2  14 years  olson  Added license words.
DBKernel.pm  1.33  14 years  parrello  Fixed to remove DESC modifiers from CREATE INDEX statements if the dbms is Postg...
DBrtns.pm  1.26  14 years  olson  Add support for using system mysql installation.
DocUtils.pm  1.4  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FIG.pm  1.436  14 years  overbeek  RAE: Swtiched to using SQL Count for the number of contigs
FIG.py  1.13  14 years  olson  Added license words.
FIG2.py  1.2  14 years  olson  Added license words.
FIGAttributes.pm  1.3  14 years  olson  Added license words.
FIGGenDB.pm  1.6  14 years  olson  Added license words.
FIGRules.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FIGUtilities.pm  1.2  14 years  olson  Added license words.
FIG_CGI.pm  1.3  14 years  olson  Added license words.
FIGjs.pm  1.13  14 years  golsen  Fixed a reversal of single and double quotes in the tooltips pop-up.
FIGnet.pm  1.2  14 years  olson  Added license words.
FIGrpc.pm  1.3  14 years  olson  Added license words.
FIGtree.pm  1.3  14 years  olson  Added license words.
FigGFF.pm  1.21  14 years  overbeek  RAE: Updating GFF files for extracting data from TIGR
FudgeTransactions.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FullLocation.pm  1.10  14 years  olson  Added license words.
GenoGraphics.pm  1.13  14 years  olson  Added license words.
GenomeIDMap.pm  1.4  14 years  olson  Added license words.
HTML.pm  1.88  14 years  overbeek  $/ fixes
HTML.py  1.6  14 years  olson  Added license words.
HtmlPageParser.pm  1.2  14 years  olson  Added license words.
InterfaceRoutines.pm  1.11  14 years  olson  Added license words.
JobScheduler.pm  1.6  14 years  olson  Added license words.
KGML.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
KGMLData.pm  1.2  14 years  olson  Added license words.
Makefile  1.7  15 years  olson  Fix makefiles for change in releasetools.
MergeTransactions.pm  1.2  14 years  olson  Added license words.
Overlap.pm  1.3  14 years  olson  Added license words.
P2P.pm  1.31  14 years  olson  Added license words.
P2Pupdate.pm  1.57  14 years  overbeek  fixes to deleted_features, replace_features_with, etc
PageBuilder.pm  1.3  14 years  olson  Added license words.
RC.pm  1.2  14 years  olson  Added license words.
README  1.1.1.1  16 years  efrank   import
SFXlate.pm  1.57  14 years  parrello  Added a "delete_genomes" command.
SameFunc.pm  1.9  14 years  olson  Added license words.
SeedDas.pm  1.20  14 years  olson  Added license words.
Sim.pm  1.7  14 years  olson  Added license words.
SproutFIG.pm  1.10  14 years  olson  Added license words.
SproutSearch.pm  1.11  14 years  olson  Added license words.
Stats.pm  1.1  14 years  parrello  Moved from Sprout.
Subsystem.pm  1.82  14 years  overbeek  fix of clustering
TestUtils.pm  1.1  14 years  parrello  Moved from Sprout.
Tracer.pm  1.36  14 years  parrello  Added a help facility to "StandardSetup".
TransactionProcessor.pm  1.5  14 years  olson  Added license words.
UnvSubsys.pm  1.16  14 years  overbeek  fix of clustering
UserDB.pm  1.2  14 years  olson  Added license words.
UserData.pm  1.4  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
__init__.py  1.2  14 years  olson  Added license words.
fastDNAml.pm  1.2  14 years  olson  Added license words.
gjoalignment.pm  1.3  14 years  golsen  Make attempt to add a duplicate id nonfatal. Having the program die in the midd...
gjolib.pm  1.2  14 years  olson  Added license words.
gjolists.pm  1.1  14 years  golsen  This package is required by gjonewicklib.pm
gjonewicklib.pm  1.3  14 years  overbeek  RAE: Correcting division by zero error
gjoparseblast.pm  1.1  14 years  golsen  Add a page for proposing a new PEG. This is not complete, and the 'create' butt...
gjoseqlib.pm  1.3  14 years  olson  Added license words.
raedraw.pm  1.11  14 years  olson  Added license words.
raelib.pm  1.29  14 years  overbeek  RAE: Swtiched to using SQL Count for the number of contigs
set_utilities.pm  1.2  14 years  olson  Added license words.
tree_utilities.pm  1.5  14 years  olson  Added license words.

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