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Index of /FigKernelPackages

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File Rev. Age Author Last log entry
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HTML.pm  1.89  14 years  efrank   fix for caBIG. 1. fix link to Ensembl 2. turn off link it IPI 3. add link to H...
README  1.1.1.1  16 years  efrank   import
DocUtils.pm  1.4  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
gjoparseblast.pm  1.1  14 years  golsen  Add a page for proposing a new PEG. This is not complete, and the 'create' butt...
UserData.pm  1.4  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FudgeTransactions.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FIGRules.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
KGML.pm  1.3  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
FIGjs.pm  1.13  14 years  golsen  Fixed a reversal of single and double quotes in the tooltips pop-up.
ApplyTransactions.pm  1.6  14 years  golsen  Don't mean to be pedantic, but I figured that I might as well add newlines at th...
gjolists.pm  1.1  14 years  golsen  This package is required by gjonewicklib.pm
gjoalignment.pm  1.3  14 years  golsen  Make attempt to add a duplicate id nonfatal. Having the program die in the midd...
Classes.pm  1.1  14 years  mkubal  added Organism class
FIG_CGI.pm  1.3  14 years  olson  Added license words.
Clearinghouse.py  1.10  14 years  olson  Added license words.
gjolib.pm  1.2  14 years  olson  Added license words.
__init__.py  1.2  14 years  olson  Added license words.
KGMLData.pm  1.2  14 years  olson  Added license words.
Overlap.pm  1.3  14 years  olson  Added license words.
FullLocation.pm  1.10  14 years  olson  Added license words.
fastDNAml.pm  1.2  14 years  olson  Added license words.
FIGAttributes.pm  1.3  14 years  olson  Added license words.
GenomeIDMap.pm  1.4  14 years  olson  Added license words.
PageBuilder.pm  1.3  14 years  olson  Added license words.
TransactionProcessor.pm  1.5  14 years  olson  Added license words.
FIGrpc.pm  1.3  14 years  olson  Added license words.
ChromosomalClusters.pm  1.3  14 years  olson  Doh, leetle typo.
P2P.pm  1.31  14 years  olson  Added license words.
raedraw.pm  1.11  14 years  olson  Added license words.
FIGGenDB.pm  1.6  14 years  olson  Added license words.
SproutSearch.pm  1.11  14 years  olson  Added license words.
GenoGraphics.pm  1.13  14 years  olson  Added license words.
BadCall.pm  1.2  14 years  olson  Added license words.
ClusterWorker.pm  1.2  14 years  olson  Added license words.
Sim.pm  1.7  14 years  olson  Added license words.
RC.pm  1.2  14 years  olson  Added license words.
Construct.pm  1.2  14 years  olson  Added license words.
UserDB.pm  1.2  14 years  olson  Added license words.
FIGnet.pm  1.2  14 years  olson  Added license words.
HtmlPageParser.pm  1.2  14 years  olson  Added license words.
SameFunc.pm  1.9  14 years  olson  Added license words.
Blast.pm  1.3  14 years  olson  Added license words.
Cluster.pm  1.11  14 years  olson  Added license words.
FIGUtilities.pm  1.2  14 years  olson  Added license words.
MergeTransactions.pm  1.2  14 years  olson  Added license words.
Annotation.pm  1.3  14 years  olson  Added license words.
FIG.py  1.13  14 years  olson  Added license words.
gjoseqlib.pm  1.3  14 years  olson  Added license words.
FIGtree.pm  1.3  14 years  olson  Added license words.
Makefile  1.7  15 years  olson  Fix makefiles for change in releasetools.
InterfaceRoutines.pm  1.11  14 years  olson  Added license words.
COPYING.TXT  1.1  14 years  olson  add license file
SeedDas.pm  1.20  14 years  olson  Added license words.
FIG2.py  1.2  14 years  olson  Added license words.
DBrtns.pm  1.26  14 years  olson  Add support for using system mysql installation.
Clearinghouse.pm  1.4  14 years  olson  Added license words.
HTML.py  1.6  14 years  olson  Added license words.
tree_utilities.pm  1.5  14 years  olson  Added license words.
SproutFIG.pm  1.10  14 years  olson  Added license words.
set_utilities.pm  1.2  14 years  olson  Added license words.
JobScheduler.pm  1.6  14 years  olson  Added license words.
CountTransactions.pm  1.2  14 years  olson  Added license words.
UnvSubsys.pm  1.16  14 years  overbeek  fix of clustering
P2Pupdate.pm  1.57  14 years  overbeek  fixes to deleted_features, replace_features_with, etc
FIG.pm  1.436  14 years  overbeek  RAE: Swtiched to using SQL Count for the number of contigs
Subsystem.pm  1.82  14 years  overbeek  fix of clustering
gjonewicklib.pm  1.3  14 years  overbeek  RAE: Correcting division by zero error
raelib.pm  1.29  14 years  overbeek  RAE: Swtiched to using SQL Count for the number of contigs
FigGFF.pm  1.21  14 years  overbeek  RAE: Updating GFF files for extracting data from TIGR
Assignments.pm  1.7  14 years  overbeek  add check_anno.cgi
SFXlate.pm  1.57  14 years  parrello  Added a "delete_genomes" command.
BasicLocation.pm  1.8  14 years  parrello  Added a method to parse out the SEED elements of a location string.
DBKernel.pm  1.33  14 years  parrello  Fixed to remove DESC modifiers from CREATE INDEX statements if the dbms is Postg...
Tracer.pm  1.36  14 years  parrello  Added a help facility to "StandardSetup".
TestUtils.pm  1.1  14 years  parrello  Moved from Sprout.
Stats.pm  1.1  14 years  parrello  Moved from Sprout.

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