[Bio] View of /FigCommon/Makefile

Revision 1.16 - (download) (annotate)
Tue Dec 4 20:09:03 2007 UTC (12 years ago) by olson
Branch: MAIN
CVS Tags: mgrast_dev_08112011, rast_rel_2009_05_18, mgrast_dev_08022011, rast_rel_2014_0912, rast_rel_2008_06_18, rast_rel_2008_06_16, mgrast_dev_05262011, rast_rel_2008_12_18, mgrast_dev_04082011, rast_rel_2008_07_21, rast_rel_2010_0928, rast_2008_0924, mgrast_version_3_2, mgrast_dev_12152011, rast_rel_2008_04_23, help, mgrast_dev_06072011, rast_rel_2008_09_30, rast_rel_2009_0925, rast_rel_2010_0526, rast_rel_2014_0729, mgrast_dev_02212011, rast_rel_2010_1206, mgrast_release_3_0, mgrast_dev_03252011, rast_rel_2010_0118, mgrast_rel_2008_0924, mgrast_rel_2008_1110_v2, rast_rel_2009_02_05, rast_rel_2011_0119, mgrast_rel_2008_0625, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, rast_rel_2008_10_09, mgrast_dev_04012011, rast_release_2008_09_29, mgrast_rel_2008_0806, mgrast_rel_2008_0923, mgrast_rel_2008_0919, rast_rel_2009_07_09, rast_rel_2010_0827, mgrast_rel_2008_1110, myrast_33, rast_rel_2011_0928, rast_rel_2008_09_29, mgrast_rel_2008_0917, rast_rel_2008_10_29, mgrast_dev_04052011, mgrast_dev_02222011, rast_rel_2009_03_26, mgrast_dev_10262011, rast_rel_2008_11_24, rast_rel_2008_08_07, HEAD
Changes since 1.15: +2 -1 lines

Rollup of release engineering changes that shoudl  make multi-architecture
installs happier.

#
# Copyright (c) 2003-2006 University of Chicago and Fellowship
# for Interpretations of Genomes. All Rights Reserved.
#
# This file is part of the SEED Toolkit.
#
# The SEED Toolkit is free software. You can redistribute
# it and/or modify it under the terms of the SEED Toolkit
# Public License.
#
# You should have received a copy of the SEED Toolkit Public License
# along with this program; if not write to the University of Chicago
# at info@ci.uchicago.edu or the Fellowship for Interpretation of
# Genomes at veronika@thefig.info or download a copy from
# http://www.theseed.org/LICENSE.TXT.
#

#
#
#

BINSCRIPTS := configure-env switch_to_release make_sandbox tool_hdr tool_hdr_py \
	setup-sge sge-daemons lwc_postprocess
PERLPACKAGES := $(wildcard *.pm)

lib:	$(foreach var, $(PERLPACKAGES), $(libdir)/$(PKGNAME)/$(var))

bin:	$(foreach var, $(BINSCRIPTS), $(bindir)/$(var))

schematools:
stDeclFiles:
stGeneratedFiles:

#
# Machinery to fix perl's Config.pm to have the correct paths
# for this installation of the SEED environment - we may be
# running in a directory other than that the perl was compiled for.
#

PERL = $(shell sed -ne 's/^RTPERL=\(.*\)/\1/p' $(RTROOT)/config/RTConfig)
#PERL = $(RTROOT)/env/$(RTARCH)/bin/perl

#
# Determine the architecture name and version for the SEED environment perl.
#

PERL_ARCH = $(shell $(PERL) -e 'use Config; print $$Config{archname}')
PERL_VERS = $(shell $(PERL) -e 'use Config; print $$Config{version}')

#
# Use these to determine the directory in which Config.pm is located.
#
PERL_ARCH_LIB = $(RTROOT)/env/$(RTARCH)/lib/perl5/$(PERL_VERS)/$(PERL_ARCH)
PERL_CONFIG_DIST = $(PERL_ARCH_LIB)/Config.pm.dist
PERL_CONFIG = $(PERL_ARCH_LIB)/Config.pm

#
# The SEED environment has a file PREFIX that declares the location
# to which the environment was installed at compilation time.
#
PERL_INST_PREFIX = $(shell cat $(RTROOT)/env/$(RTARCH)/PREFIX)

#
# Fix Config.pm by replacing the install prefix with the current location.
#

fix_perl_configpm: $(PERL_CONFIG_DIST)
	chmod +w $(PERL_CONFIG)
	sed -e 's,$(PERL_INST_PREFIX),$(RTROOT)/env/$(RTARCH),g' < $(PERL_CONFIG_DIST) > $(PERL_CONFIG)
	chmod -w $(PERL_CONFIG)
	touch fix_perl_configpm

#
# Copy the original Config.pm to Config.pm.dist if we haven't done so before.
#

$(PERL_CONFIG_DIST): $(PERL_CONFIG)
	if [ ! -f $(PERL_CONFIG_DIST) ] ; then \
		cp $(PERL_CONFIG) $(PERL_CONFIG_DIST); \
	fi
	chmod +w $(PERL_CONFIG)
	chmod -w $(PERL_CONFIG_DIST)
	touch $(PERL_CONFIG_DIST)
	chmod +w $(PERL_CONFIG_DIST)

test:

clean:
	-rm fix_perl_configpm

$(bindir)/%: $(TOPDIR)/$(PKGNAME)/%
	cp $< $(bindir)/.

$(bindir)/%: $(TOPDIR)/$(PKGNAME)/%.pl $(TOOL_HDR)
	( cat $(TOOL_HDR) $< > $@; chmod +x $@ )

$(libdir)/$(PKGNAME)/%.pm: $(TOPDIR)/$(PKGNAME)/%.pm
	cp  $< $@