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Revision 1.22 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Oct 2 22:01:11 2006 UTC (13 years, 2 months ago) by hwang
Branch: MAIN
CVS Tags: HEAD
Changes since 1.21: +56 -38 lines
Diff to previous 1.21
Take out columns that are not wanted by Leslie

Revision 1.21 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 16 19:06:36 2006 UTC (13 years, 7 months ago) by hwang
Branch: MAIN
Changes since 1.20: +8 -8 lines
Diff to previous 1.20
Files were changed to separate the links from the text. Links need to be separated because links are out of date after awhile.
The saved text in drug_targets.pl is in a format recognized by ShowTable.pl

Revision 1.20 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 6 14:20:15 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.19: +1 -1 lines
Diff to previous 1.19
fixed protein data base to protein data bank typo

Revision 1.19 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Feb 6 04:51:52 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.18: +3 -1 lines
Diff to previous 1.18
Added Leslie's comments for the front page.

Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Feb 5 22:08:52 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.17: +5 -5 lines
Diff to previous 1.17
Search boxes are within two horizontal bars

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Feb 5 04:55:47 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.16: +5 -3 lines
Diff to previous 1.16
Literature tag was broken because of formating error. Fixed now

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Feb 4 03:10:09 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.15: +92 -32 lines
Diff to previous 1.15
ShowTable.pl:
-took out underscore, improve download feature, improve layouts, sort by author enabled, link to subsystem
ShowTableKey.pl
-improve column description
drug_targets.pl
-link to current list

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Feb 3 21:51:03 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.14: +11 -27 lines
Diff to previous 1.14
cgi should point to Showtable.cgi not test.cgi

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Feb 3 21:23:51 2006 UTC (13 years, 10 months ago) by hwang
Branch: MAIN
Changes since 1.13: +148 -48 lines
Diff to previous 1.13
Additional functionality of getting specific literature. Cleaned the presentation.

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Sun Nov 13 00:04:48 2005 UTC (14 years, 1 month ago) by hwang
Branch: MAIN
Changes since 1.12: +136 -91 lines
Diff to previous 1.12
Add coloring to the table.
Pastel Blue for good pdb, pastel red for bad pdb.
Linked CLibe Attributes to exisiting pdbs

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 27 20:12:03 2005 UTC (14 years, 2 months ago) by hwang
Branch: MAIN
Changes since 1.11: +7 -7 lines
Diff to previous 1.11
For the 9/18 week demo changes...

ShowTableKey.pl  -- we updated to address Rick's comments (Tag,Category explainations)
cat_coding.pl -- updated to be essential projected
ShowTable.pl -- changed *not a good pdb* to *poor pdb hit*

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Sep 14 22:32:02 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.10: +4 -3 lines
Diff to previous 1.10
fixed pdb matching for search query.

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 12 18:15:42 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.9: +16 -4 lines
Diff to previous 1.9
ShowTable.pl - added thanks and directions

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Mon Sep 12 04:13:00 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.8: +30 -6 lines
Diff to previous 1.8
ShowTable.pl - added a subroutine to delete old temporarily files
best_pdb.pl, drug_targets.pl, ShowTable.pl - The temporarily files were not created in consistant places. Changed all
    temporary files to be created in the Fig_Config::Tmp directory

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Sat Sep 10 20:24:03 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.7: +148 -129 lines
Diff to previous 1.7
ShowTableKey is a key of the categories.
ShowTable - added numerical sort, fixed getPDBs

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 6 19:30:45 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.6: +61 -32 lines
Diff to previous 1.6
ShowTable.pl - changed syntax so that is won't break for "".
             - Added print statements to show user for the website what (s)he is searching for

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 6 17:33:53 2005 UTC (14 years, 3 months ago) by jzinner
Branch: MAIN
Changes since 1.5: +17 -17 lines
Diff to previous 1.5
updated ShowTable.pl to not print the columns mentined before.  And not download print columns when downloaded from ShowTable.pl

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Sep 6 16:53:03 2005 UTC (14 years, 3 months ago) by jzinner
Branch: MAIN
Changes since 1.4: +69 -2 lines
Diff to previous 1.4
In ShowTable.pl -- only PDB's with e Values of less than 1e-20 are shown on screen.  Because e Values for PDB's are calculated in a manner similar to how e Values are calcalculated in the SEED we were confident that 1e-20 will return only well matching PDB's.
Many other items are derived from the PDB values so those items are not shown when the PDB match is bad.
When the PDB Free is higher than 1e-20, Don't show:  PDB Free, e Value Free, PDB Free Title, PASS ASP, PASS Wt of Largest Pocket, PDB Seq Lenght, ProtDist Score
When PDB Bound is higher than 1e-20, Don't show: PDB Bound, e Value Bound, PDB Ligand CLiBE, Total E, Van der Waals, Hydrogen Bond, EI, Solvation Energy

To cat_coding.pl I added three extra categrory types SE-K, SE-P, ES-P.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Sep 2 02:05:06 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.3: +4 -4 lines
Diff to previous 1.3
Added a button to allow user to save customized query to the master list. The master list can be view
by ShowTable.cgi

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Aug 31 20:30:12 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.2: +19 -22 lines
Diff to previous 1.2
Changed paths so it is not absolute and check to see if path exists.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Aug 31 17:12:59 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changes since 1.1: +26 -31 lines
Diff to previous 1.1
Add columns to tables that have the latest data for CLiBE

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Aug 31 15:31:29 2005 UTC (14 years, 3 months ago) by hwang
Branch: MAIN
Changed files to incorporate fangfang's and kaitlyn's script.
ShowTable.pl
	Shows and edits the tables in the archives

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