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Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 28 21:43:48 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
CVS Tags: HEAD, myrast_33
Changes since 1.3: +19 -1 lines
Diff to previous 1.3
add text download option.

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 27 17:46:11 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.2: +2 -2 lines
Diff to previous 1.2
Pull the db stuff out into Clearinghouse::ch_database. This module exports db_init(). It also initializes the
contents of CH_Config to have the database stuff from FIG_Config if it's not already set. This gives us
a good default behavior while allowing modification. For instance, on my laptop which has a mysql
database for the normal SEED, the CH_Config looks like this:

package CH_Config;

$dbms = "Pg";
$db = "clearinghouse";
$dbuser = "olson";
$dbpass = "";
$dbport = "10101";
$service_url = "http://localhost/FIG/clearinghouse_services.cgi";
$dir = "/Users/olson/chdir";

Do some misc cleanup on the services.

Add gen_seed_tables, which generates a postgres input file (suitable for loading with
'psql -f load_seed.sql') for the genomes in the current seed.

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 19 20:55:08 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Changes since 1.1: +4 -4 lines
Diff to previous 1.1
Many changes in code walkthrough

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 13 21:17:28 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Added upload capability

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