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Revision 1.18 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Jun 14 16:02:34 2005 UTC (14 years, 4 months ago) by olson
Branch: MAIN
CVS Tags: HEAD, myrast_33
Changes since 1.17: +1 -0 lines
Diff to previous 1.17
genome upload script.

Revision 1.17 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 9 19:31:20 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.16: +49 -4 lines
Diff to previous 1.16
Added subsystem version suppression

Revision 1.16 - (view) (download) (as text) (annotate) - [select for diffs]
Fri May 6 18:06:46 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.15: +11 -1 lines
Diff to previous 1.15
Added count to browser heading

Revision 1.15 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 3 20:16:56 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.14: +1 -1 lines
Diff to previous 1.14
Added sort explanation

Revision 1.14 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 3 17:58:47 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.13: +1 -1 lines
Diff to previous 1.13
Added hidden field for teh sort column

Revision 1.13 - (view) (download) (as text) (annotate) - [select for diffs]
Tue May 3 17:38:18 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.12: +3 -0 lines
Diff to previous 1.12
Add page header.

Revision 1.12 - (view) (download) (as text) (annotate) - [select for diffs]
Mon May 2 21:31:43 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.11: +6 -2 lines
Diff to previous 1.11
Factor some stuff out to utils.pm
Misc cleanup.
add 1-SUBSYSTEM type.

Revision 1.11 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Apr 29 20:48:34 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.10: +23 -4 lines
Diff to previous 1.10
Add some validation to uploads.
Tweak the browser some more.

Revision 1.10 - (view) (download) (as text) (annotate) - [select for diffs]
Fri Apr 29 18:38:14 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.9: +22 -11 lines
Diff to previous 1.9
CH fixes

Revision 1.9 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 28 20:40:57 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.8: +30 -12 lines
Diff to previous 1.8
Some tweaks

Revision 1.8 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 28 18:16:53 2005 UTC (14 years, 5 months ago) by disz
Branch: MAIN
Changes since 1.7: +3 -1 lines
Diff to previous 1.7
CH CHANGES

Revision 1.7 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 27 17:46:10 2005 UTC (14 years, 5 months ago) by olson
Branch: MAIN
Changes since 1.6: +27 -27 lines
Diff to previous 1.6
Pull the db stuff out into Clearinghouse::ch_database. This module exports db_init(). It also initializes the
contents of CH_Config to have the database stuff from FIG_Config if it's not already set. This gives us
a good default behavior while allowing modification. For instance, on my laptop which has a mysql
database for the normal SEED, the CH_Config looks like this:

package CH_Config;

$dbms = "Pg";
$db = "clearinghouse";
$dbuser = "olson";
$dbpass = "";
$dbport = "10101";
$service_url = "http://localhost/FIG/clearinghouse_services.cgi";
$dir = "/Users/olson/chdir";

Do some misc cleanup on the services.

Add gen_seed_tables, which generates a postgres input file (suitable for loading with
'psql -f load_seed.sql') for the genomes in the current seed.

Revision 1.6 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 21 15:38:38 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Changes since 1.5: +4 -7 lines
Diff to previous 1.5
added date to browser

Revision 1.5 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 20 19:54:31 2005 UTC (14 years, 6 months ago) by olson
Branch: MAIN
Changes since 1.4: +3 -1 lines
Diff to previous 1.4
Replace hardcoded service url with $CH_Config::service_url.

Unset HTTP_HOST in the service so that FIG::cgi_url  works.

Revision 1.4 - (view) (download) (as text) (annotate) - [select for diffs]
Tue Apr 19 20:55:08 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Changes since 1.3: +12 -6 lines
Diff to previous 1.3
Many changes in code walkthrough

Revision 1.3 - (view) (download) (as text) (annotate) - [select for diffs]
Thu Apr 14 20:46:35 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Changes since 1.2: +3 -15 lines
Diff to previous 1.2
Added web page for package uploading

Revision 1.2 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 13 21:17:28 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Changes since 1.1: +24 -7 lines
Diff to previous 1.1
Added upload capability

Revision 1.1 - (view) (download) (as text) (annotate) - [select for diffs]
Wed Apr 13 19:08:46 2005 UTC (14 years, 6 months ago) by disz
Branch: MAIN
Added vanilla browser capability

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