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Revision 1.1 - (download) (as text) (annotate)
Tue Feb 15 21:25:06 2011 UTC (9 years, 4 months ago) by wilke
Branch: MAIN
CVS Tags: mgrast_dev_08112011, mgrast_dev_08022011, mgrast_dev_03052011, mobedac_release_05302012, mgrast_dev_05262011, mgrast_dev_04082011, mgrast_version_3_2, mgrast_dev_12152011, mgrast_dev_06072011, mgrast_dev_10262011, mgrast_dev_02212011, mgrast_release_3_0, mgrast_dev_03252011, mgrast_release_3_0_4, mgrast_release_3_0_2, mgrast_release_3_0_3, mgrast_release_3_0_1, mgrast_dev_03312011, mgrast_release_3_1_2, mgrast_release_3_1_1, mgrast_release_3_1_0, mgrast_dev_04132011, mgrast_dev_04012011, mgrast_dev_04052011, mgrast_dev_02222011, HEAD
*** empty log message ***

echo Downloading Refseq `date`
lftp -c 'open -e "mirror -e --delete-first /refseq/release/ /vol/biodb/ncbi/refseq" ftp://ftp.ncbi.nih.gov'
echo Downloading NCBI NR
time lftp -c 'open -e "mirror -e --delete-first -I nr* --no-recursion /blast/db/ /vol/biodb/ncbi/ncbi_fasta_files" ftp://ftp.ncbi.nih.gov'
echo Downloading Uniprot
time lftp -c 'open -e"mirror -e --parallel=2 /pub/databases/uniprot/current_release/knowledgebase/complete /vol/biodb/uniprot/current_release/complete/" ftp.uniprot.org'
echo Download KEGG
time lftp -c 'open -e"mirror --delete --parallel=2 /pub/kegg/release/current/ /vol/biodb/kegg/current" ftp://ftp.genome.ad.jp'

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