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Revision 1.11 - (download) (annotate)
Wed Jul 20 16:39:40 2011 UTC (8 years, 8 months ago) by tharriso
Branch: MAIN
CVS Tags: mgrast_dev_08112011, mgrast_dev_08022011, mgrast_release_3_1_1
Changes since 1.10: +9 -9 lines
new versions

RefSeq	NCBI	Release 48	NCBI Reference Sequences Database	National Center for Biotechnology Information	protein	http://www.ncbi.nlm.nih.gov	http://www.ncbi.nlm.nih.gov/protein/
GenBank	NCBI	Release 184	NIH Genetic Sequence Database	National Center for Biotechnology Information	protein	http://www.ncbi.nlm.nih.gov	http://www.ncbi.nlm.nih.gov/protein/
KEGG	KEGG	Release 56	Kyoto Encyclopedia of Genes and Genomes		protein	http://www.genome.jp/kegg	http://www.genome.jp/dbget-bin/www_bget?
SwissProt	UniProt	Release 2011_07	Swiss-Prot UniProt Knowledgebase	UniProt Knowledgebase	protein	http://www.uniprot.org	http://www.uniprot.org/uniprot/
TrEMBL	UniProt	Release 2011_07	TrEMBL UniProt Knowledgebase	UniProt Knowledgebase	protein	http://www.uniprot.org	http://www.uniprot.org/uniprot/
IMG	JGI	3.4	Integrated Microbial Genomes at the Joint Genome Institute	Joint Genome Institute	protein	http://img.jgi.doe.gov	http://img.jgi.doe.gov/cgi-bin/w/main.cgi?section=GeneDetail&gene_oid=
SEED	SEED		The SEED Project		protein	http://www.theseed.org	http://seed-viewer.theseed.org/seedviewer.cgi?page=Annotation&feature=
PATRIC	VBI	April 2011	Pathosystems Resource Integration Center	Virginia Bioinformatics Institute	protein	http://patric.vbi.vt.edu	
eggNOG	eggNOG	2.0	evolutionary genealogy of genes: Non-supervised Orthologous Groups		protein	http://eggnog.embl.de	
GO	GO		Gene Ontology	Gene Ontology	ontology	http://www.geneontology.org	http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO:
KO	KEGG	Release 56	KEGG Orthology	Kyoto Encyclopedia of Genes and Genomes	ontology	http://www.genome.jp/kegg	http://www.genome.jp/dbget-bin/www_bget?ko:
Subsystems	SEED		SEED Subsystems Annotation	The SEED Project	ontology	http://www.theseed.org	http://seed-viewer.theseed.org/seedviewer.cgi?page=Subsystems&subsystem=
COG	eggNOG	2.0	eggNOG: Clusters of Orthologous Groups	evolutionary genealogy of genes: Non-supervised Orthologous Groups	ontology	http://eggnog.embl.de	http://www.ncbi.nlm.nih.gov/COG/grace/wiew.cgi?
NOG	eggNOG	2.0	eggNOG: Non-supervised Orthologous Groups	evolutionary genealogy of genes: Non-supervised Orthologous Groups	ontology	http://eggnog.embl.de	
RDP	RDP	10.26	Ribosomal Database Project		rna	http://rdp.cme.msu.edu	
Greengenes	Greengenes		16S rRNA Gene Database		rna	http://greengenes.lbl.gov	
SSU	SILVA	Release 106	SILVA Small Subunit rRNA Database	SILVA rRNA Database Project	rna	http://www.arb-silva.de	
LSU	SILVA	Release 106	SILVA Large Subunit rRNA Database	SILVA rRNA database project	rna	http://www.arb-silva.de	

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